[INFO] fetching crate salmon-align 2.7.0...
[INFO] checking salmon-align-2.7.0 against 40527f3e444fde1deb361751bdef9b9e11d1b971+rustflags=--cfg crater_hack --force-warn invalid-c-variadic-arguments for pr-162478
[INFO] extracting crate salmon-align 2.7.0 into /workspace/builds/worker-4-tc2/source
[INFO] started tweaking crates.io crate salmon-align 2.7.0
[INFO] removed 0 missing examples
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate salmon-align 2.7.0
[INFO] tweaked toml for crates.io crate salmon-align 2.7.0 written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate salmon-align 2.7.0 on toolchain 40527f3e444fde1deb361751bdef9b9e11d1b971
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+40527f3e444fde1deb361751bdef9b9e11d1b971" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate salmon-align 2.7.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+40527f3e444fde1deb361751bdef9b9e11d1b971" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815
[INFO] running `Command { std: "docker" "start" "25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815" "/opt/rustwide/cargo-home/bin/cargo" "+40527f3e444fde1deb361751bdef9b9e11d1b971" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid --cfg crater_hack --force-warn invalid-c-variadic-arguments" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815" "/opt/rustwide/cargo-home/bin/cargo" "+40527f3e444fde1deb361751bdef9b9e11d1b971" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling find-msvc-tools v0.1.11
[INFO] [stderr]    Compiling crossbeam-deque v0.8.7
[INFO] [stderr]     Checking either v1.18.0
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking zlib-rs v0.6.7
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]     Checking indexmap v2.14.1
[INFO] [stderr]     Checking log v0.4.34
[INFO] [stderr]    Compiling crc32fast v1.5.1
[INFO] [stderr]    Compiling syn v3.0.4
[INFO] [stderr]     Checking crossbeam-epoch v0.9.20
[INFO] [stderr]     Checking crossbeam-channel v0.5.16
[INFO] [stderr]     Checking bstr v1.13.1
[INFO] [stderr]    Compiling getrandom v0.4.3
[INFO] [stderr]     Checking miniz_oxide v0.9.1
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking bit-vec v0.10.1
[INFO] [stderr]    Compiling zerocopy v0.8.56
[INFO] [stderr]     Checking chacha20 v0.10.2
[INFO] [stderr]    Compiling zerocopy-derive v0.8.56
[INFO] [stderr]    Compiling matrixmultiply v0.3.11
[INFO] [stderr]    Compiling darling_core v0.21.3
[INFO] [stderr]     Checking rayon-core v1.13.0
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]     Checking rand v0.10.2
[INFO] [stderr]     Checking noodles-core v0.20.0
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking dashmap v6.2.1
[INFO] [stderr]     Checking xxhash-rust v0.8.18
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]    Compiling snap v1.1.2
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling impl-tools-lib v0.11.4
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]     Checking num-format v0.4.4
[INFO] [stderr]     Checking env_filter v2.0.0
[INFO] [stderr]     Checking pluralizer v0.5.0
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling value-traits-derive v0.2.1
[INFO] [stderr]    Compiling lender-derive v0.1.3
[INFO] [stderr]     Checking num-integer v0.1.47
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[INFO] [stderr]     Checking approx v0.5.1
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[INFO] [stderr]    Compiling jobserver v0.1.35
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[INFO] [stderr]     Checking transpose v0.2.3
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[INFO] [stderr]     Checking primal-check v0.3.4
[INFO] [stderr]    Compiling mem_dbg-derive v0.3.4
[INFO] [stderr]     Checking sysinfo v0.36.1
[INFO] [stderr]     Checking arbitrary-chunks v0.4.1
[INFO] [stderr]     Checking stable_try_trait_v2 v1.75.1
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[INFO] [stderr]     Checking twox-hash v2.1.4
[INFO] [stderr]     Checking aliasable v0.1.3
[INFO] [stderr]     Checking partition v0.1.2
[INFO] [stderr]     Checking maybe-dangling v0.1.2
[INFO] [stderr]    Compiling cc v1.4.4
[INFO] [stderr]     Checking lz4_flex v0.14.0
[INFO] [stderr]     Checking lender v0.6.2
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking lambert_w v1.2.34
[INFO] [stderr]     Checking rustfft v6.4.1
[INFO] [stderr]     Checking value-traits v0.2.1
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]     Checking env_logger v0.11.11
[INFO] [stderr]     Checking thread-priority v3.1.1
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]    Compiling ambassador v0.5.1
[INFO] [stderr]     Checking dsi-progress-logger v0.8.9
[INFO] [stderr]     Checking mem_dbg v0.4.4
[INFO] [stderr]     Checking itertools v0.15.0
[INFO] [stderr]     Checking crossbeam-queue v0.3.13
[INFO] [stderr]     Checking buffer-redux v1.1.0
[INFO] [stderr]     Checking atomic-primitive v0.1.4
[INFO] [stderr]     Checking sync-cell-slice v0.9.14
[INFO] [stderr]     Checking scroll v0.13.0
[INFO] [stderr]     Checking num-primitive v0.2.1
[INFO] [stderr]    Compiling impl-tools v0.11.4
[INFO] [stderr]     Checking needletail v0.7.3
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling liblzma-sys v0.3.13
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]    Compiling ksw2rs v0.2.0
[INFO] [stderr]     Checking bzip2 v0.5.2
[INFO] [stderr]    Compiling darling_macro v0.21.3
[INFO] [stderr]    Compiling darling v0.21.3
[INFO] [stderr]     Checking num v0.4.3
[INFO] [stderr]     Checking rand_distr v0.6.0
[INFO] [stderr]     Checking rand_pcg v0.10.2
[INFO] [stderr]     Checking coitrees v0.4.0
[INFO] [stderr]    Compiling derive_setters v0.1.9
[INFO] [stderr]     Checking liblzma v0.3.6
[INFO] [stderr]    Compiling derivative v2.2.0
[INFO] [stderr]    Compiling bytemuck_derive v1.12.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.20
[INFO] [stderr]    Compiling serde_derive v1.0.229
[INFO] [stderr]    Compiling enum-ordinalize-derive v4.4.2
[INFO] [stderr]    Compiling libradicl-macros v0.18.0
[INFO] [stderr]    Compiling enum-ordinalize v4.4.2
[INFO] [stderr]    Compiling educe v0.7.6
[INFO] [stderr]     Checking noodles-bgzf v0.51.0
[INFO] [stderr]     Checking bgzip v0.3.1
[INFO] [stderr]     Checking noodles-csi v0.60.0
[INFO] [stderr]     Checking bytemuck v1.25.2
[INFO] [stderr]     Checking thiserror v2.0.20
[INFO] [stderr]     Checking rdst v0.20.14
[INFO] [stderr]     Checking safe_arch v1.2.0
[INFO] [stderr]     Checking succinctly v0.6.0
[INFO] [stderr]     Checking noodles-sam v0.89.0
[INFO] [stderr]     Checking noodles-gff v0.61.0
[INFO] [stderr]     Checking wide v1.7.0
[INFO] [stderr]     Checking noodles-gtf v0.56.0
[INFO] [stderr]     Checking serde v1.0.229
[INFO] [stderr]     Checking noodles-bam v0.94.0
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking realfft v3.5.0
[INFO] [stderr]     Checking noodles v0.115.0
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking niffler v3.0.0
[INFO] [stderr]     Checking ahash v0.8.12
[INFO] [stderr]     Checking salmon-core v2.7.0
[INFO] [stderr]     Checking libradicl v0.18.0
[INFO] [stderr]     Checking bramble-rs v0.1.8
[INFO] [stderr]     Checking salmon-eqclass v2.7.0
[INFO] [stderr]     Checking sux v0.14.0
[INFO] [stderr]     Checking salmon-rad v2.7.0
[INFO] [stderr]     Checking simba v0.10.2
[INFO] [stderr]     Checking nalgebra v0.35.0
[INFO] [stderr]     Checking statrs v0.19.1
[INFO] [stderr]     Checking salmon-infer v2.7.0
[INFO] [stderr]     Checking salmon-model v2.7.0
[INFO] [stderr]     Checking salmon-align v2.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 20s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815", kill_on_drop: false }`
[INFO] [stdout] 25e62db3e1bd024b831c29c10460dc4162e3927e964121f5cf4a5d598add5815
